v0.1.5

What's Changed

• Make repeats without Zooma retries an option by @pinin4fjords in #21
• Copy SDRF functionality to output dir by @pcm32 in #22
• Only consider non-blank values when parsing cell types file for inferred cell types by @pinin4fjords in #23
• add new cell type fields by @pinin4fjords in #24
• Source default zooma exclusions file via env var, not assumed path by @pinin4fjords in #25

New Contributors

• @pcm32 made their first contribution in #22

Full Changelog: v0.1.4...v0.1.5

Container for using experiment-metadata

In this release v0.1.4

• We have a docker container encapsulating dependencies including conda packages for perl-modules and atlas-experiment-metadata. See #15 #16.
• This allows running condense_sdrf scripts for single cell in any workflow or CI tests.

v0.1.3

• Add parameter for field names delimiter in output SDRF file when running unmelt_condensed.R #14

v0.1.2

• Ensure fields merged from .cells.txt files get ontology terms #13

v0.1.1

• Fix issue with non-specific cell id field regex #12

v0.1.0

• GXA and SCXA privacy checks #10
• Parameterise cell type field #11

Bumped to 0.1.0 to indicate some stability.

v0.0.6

• Minor fix to condensed SDRF unmelt #9

v0.0.5

• Fix to single-cell condensed SDRF generation for droplet experiments #8

v0.0.4

• Add case-insensitivity for matching fields from cells file #7

v0.0.3

• Expand functionality that extracts inferred cell type from .cells.txt files to a specified list #6