Add Single Cell and Spatial Omics shed categories #335
Conversation
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..hehehehe... you're opening a pandora box here with the older tools @pavanvidem :-). I'm all good with this, but, do you know if there are any unintended consequences of pushing again to the tooldshed tools with the same versions and galaxy build numbers? I wouldn't want to mangle the content on the toolshed like that (but maybe the toolshed handles this gracefully, I don't know). |
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afaik, toolshed wouldn't notice the changes in .shed.yml until there is a tool update. Anyways, .shed.yml has only tool metdatata, nothing specific related to the versions. |
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the problem we have though is that the CI is what pushing to the toolshed, and the CI won't push things if tests are not passed :-(, so not sure how to do this (as fixing all the newer requirements from the CI is beyond anyone's time availability). In other words, even if I would merge, the changes wouldn't be pushed... |
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Maybe if we limit this for the tools that are really needed? |
Description
Adds recently introduced Single Cell and Spatial Omics shed categories in .shed.yml of all the relevant tools. @pcm32 having this ready asap will help @nomadscientist for her biohackathon project next week. Thanks!