Senior Bioinformatician at the European Bioinformatics Institute
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EMBL-EBI
- Cambridge, UK
- https://orcid.org/0000-0003-1959-8199
- @compbiology
- in/compbiology
Highlights
- Pro
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ebi-gene-expression-group/bulk-recalculations
ebi-gene-expression-group/bulk-recalculations PublicSnakemake workflow for new experiments processing, reprocessing and recalculations steps
Python 1
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ebi-gene-expression-group/bioconductor-ExpressionAtlas
ebi-gene-expression-group/bioconductor-ExpressionAtlas PublicDownload datasets from EMBL-EBI Expression Atlas
R 1
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ebi-gene-expression-group/atlas-ca-analysis
ebi-gene-expression-group/atlas-ca-analysis PublicAtlas analysis for controlled-access bulk datasets, such as EGA
Shell
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ebi-gene-expression-group/ega_downloader
ebi-gene-expression-group/ega_downloader PublicNextflow wf for downloading and arranging EGA datasets before analysis
R
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fCCAC
fCCAC PublicBioconductor package - functional Canonical Correlation Analysis to evaluate Covariance between nucleic acid sequencing datasets
R
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