Notebook for training keypoint-moseq on 10 EPM videos #13
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sfmig
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Oct 2, 2024
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thanks @niksirbi!
Since it's a bit faffy to comment the notebook, I pushed directly some changes, hope that is ok!
I just expanded some acronyms and sentences, and formatted some references to keypoint-moseq. I also fixed a typo that was inherited from the other notebook re the activation of the conda environment (see #18)
I leave you to give the final ok and press the big green button :)
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Thanks Sofia, you definitely improved the text! I don't mind you pushing to this branch at all. Regarding the typo in the environment name, I had copy pasted it from the CorrectionAh, you already did the fix yourself. Nevermind, all good. |
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Adds a new notebook that trains a keypoint-moseq model on 10 videos of the mouse EPM dataset.
The produced project folder is included in the course's sample data, so that we can use the model for inference.
I will not have the students walk though this notebook during the course, I will just show its results.
Nevertheless, it's good to keep track of it here, as it serves as a living documentation for how the keypoint-moseq derivatives in the sample dataset were produced.