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Update sceasy to 0.0.7 in Galaxy #292

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quacksawbones opened this issue Apr 26, 2023 · 2 comments
Open

Update sceasy to 0.0.7 in Galaxy #292

quacksawbones opened this issue Apr 26, 2023 · 2 comments

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@quacksawbones
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Hi Folks,

The current version of sceasy is 0.0.7 (https://github.com/cellgeni/sceasy/tree/v0.0.7), but the latest version available in Galaxy is 0.0.5 (https://toolshed.g2.bx.psu.edu/repository?repository_id=a4381cd7162476d9).

Could we get an sceasy update to 0.0.7 in Galaxy?

Thanks,

@pcm32
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pcm32 commented Apr 29, 2023

Hi, I have started a PR #294 , but I see that there are no test data unfortunately to try this with. I'll try to find time to find some small datasets and try them, but not sure when that might be :-( .

@pcm32
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pcm32 commented Apr 29, 2023

@quacksawbones I have found some test datasets, however the size differences I'm getting in the transformations against expected files are large. Would you be able to check if the resulting files in each case make sense compared to their inputs here #294 ? Thanks!

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