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Padding of embedding numbering on AnnData Operations #279

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pcm32 opened this issue Jan 12, 2023 · 1 comment
Open

Padding of embedding numbering on AnnData Operations #279

pcm32 opened this issue Jan 12, 2023 · 1 comment
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persist-seq Requests from Persist-Seq

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pcm32 commented Jan 12, 2023

Currently our merged AnnData object is viewed like this on cellxgene:

image

it would be nicer if we padded the persplexity and neighbour numbers so that the all show the same number of digits and get properly sorted there.
@pcm32 pcm32 added the persist-seq Requests from Persist-Seq label Jan 12, 2023
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pcm32 commented Feb 15, 2023

Issue with padding though is that a perplexity of 001 will look weird, even though ordered. It will look more like a serial number than a perplexity (or number of neighbours for that matter.

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