Fix logPrefix path (#30)

* Remove workDir as basedir for logPrefix * bump VERSION --------- Co-authored-by: Anil Thanki <[email protected]>
ebi-gene-expression-group · Feb 27, 2024 · 2b1f69b · 2b1f69b
1 parent 91132e9
commit 2b1f69b
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diff --git a/VERSION b/VERSION
@@ -1 +1 @@
-0.2.5
+0.2.6
diff --git a/atlas-slurm b/atlas-slurm
@@ -128,7 +128,7 @@ else
             logFile=${logPrefix}.out
         fi 
 	sleep 10
-	slurm_monitor_job "$slurmJobId" "$pollFreqSecs" "${workingDir}/${logFile}" "$monitorStyle" "$logCleanup" "$returnStdout" "$quiet"
+	slurm_monitor_job "$slurmJobId" "$pollFreqSecs" "$logFile" "$monitorStyle" "$logCleanup" "$returnStdout" "$quiet"
         slurmExitCode=$?
 
         if [ $slurmExitCode -ne 0 ]; then