DispersiveMultiLayer no longer uses MATLAB
#286
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willGraham01
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May 12, 2023 12:31
- xyz_vector struct of 3 vector<double>s introduced - DispersiveMultiLayer is now a struct with xyz_vector members - Preserve method for checking if the medium is dispersive - Temporarily disable unit tests for DispersiveMultiLayer class - HDF5Reader::read() can now assemble a DispersiveMultiLayer - HDF5Reader has a method for reading directly into a vector<T> - H5Dimension can be passed a H5::DataSet as well as a H5::DataSpace
* Move content of benchmark_scripts readme into doc/developers * Update CI attempt 1 * Actually use the right syntax * Force python version to prevent MacOS using python2.7 * Rename files to better match the data they produce * Aplease windows syntax * Remove pip cache due to known windows bug: actions/setup-python#436
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* Rework DispersiveMultiLayer class into a struct. TDMS builds. - xyz_vector struct of 3 vector<double>s introduced - DispersiveMultiLayer is now a struct with xyz_vector members - Preserve method for checking if the medium is dispersive - Temporarily disable unit tests for DispersiveMultiLayer class - HDF5Reader::read() can now assemble a DispersiveMultiLayer - HDF5Reader has a method for reading directly into a vector<T> - H5Dimension can be passed a H5::DataSet as well as a H5::DataSpace * Update paths now we need HDF5 data as well as matlab data * TDMS builds and tests HDF5Reader::read_data_from_group (passes, no) * Fix seg-fault in read_dataset_from_group * Add DispersiveMultiLayer test * Update DispersiveMultiLayer tests to not be entangled with the MATLAB jargon * Update the CI so things actually work * Move content of benchmark_scripts readme into doc/developers * Update CI to produce unit test `.mat` and `.hdf5` data (#289) * Move content of benchmark_scripts readme into doc/developers * Update CI attempt 1 * Actually use the right syntax * Force python version to prevent MacOS using python2.7 * Rename files to better match the data they produce * Aplease windows syntax * Remove pip cache due to known windows bug: actions/setup-python#436 * Apply suggestions from code review
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* Rework DispersiveMultiLayer class into a struct. TDMS builds. - xyz_vector struct of 3 vector<double>s introduced - DispersiveMultiLayer is now a struct with xyz_vector members - Preserve method for checking if the medium is dispersive - Temporarily disable unit tests for DispersiveMultiLayer class - HDF5Reader::read() can now assemble a DispersiveMultiLayer - HDF5Reader has a method for reading directly into a vector<T> - H5Dimension can be passed a H5::DataSet as well as a H5::DataSpace * Update paths now we need HDF5 data as well as matlab data * TDMS builds and tests HDF5Reader::read_data_from_group (passes, no) * Fix seg-fault in read_dataset_from_group * Add DispersiveMultiLayer test * Update DispersiveMultiLayer tests to not be entangled with the MATLAB jargon * Update the CI so things actually work * Move content of benchmark_scripts readme into doc/developers * Update CI to produce unit test `.mat` and `.hdf5` data (#289) * Move content of benchmark_scripts readme into doc/developers * Update CI attempt 1 * Actually use the right syntax * Force python version to prevent MacOS using python2.7 * Rename files to better match the data they produce * Aplease windows syntax * Remove pip cache due to known windows bug: actions/setup-python#436 * Apply suggestions from code review
willGraham01
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Jun 1, 2023
* Rework DispersiveMultiLayer class into a struct. TDMS builds. - xyz_vector struct of 3 vector<double>s introduced - DispersiveMultiLayer is now a struct with xyz_vector members - Preserve method for checking if the medium is dispersive - Temporarily disable unit tests for DispersiveMultiLayer class - HDF5Reader::read() can now assemble a DispersiveMultiLayer - HDF5Reader has a method for reading directly into a vector<T> - H5Dimension can be passed a H5::DataSet as well as a H5::DataSpace * Update paths now we need HDF5 data as well as matlab data * TDMS builds and tests HDF5Reader::read_data_from_group (passes, no) * Fix seg-fault in read_dataset_from_group * Add DispersiveMultiLayer test * Update DispersiveMultiLayer tests to not be entangled with the MATLAB jargon * Update the CI so things actually work * Move content of benchmark_scripts readme into doc/developers * Update CI to produce unit test `.mat` and `.hdf5` data (#289) * Move content of benchmark_scripts readme into doc/developers * Update CI attempt 1 * Actually use the right syntax * Force python version to prevent MacOS using python2.7 * Rename files to better match the data they produce * Aplease windows syntax * Remove pip cache due to known windows bug: actions/setup-python#436 * Apply suggestions from code review
willGraham01
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Jun 1, 2023
* `DispersiveMultiLayer` no longer uses MATLAB (#286) * Rework DispersiveMultiLayer class into a struct. TDMS builds. - xyz_vector struct of 3 vector<double>s introduced - DispersiveMultiLayer is now a struct with xyz_vector members - Preserve method for checking if the medium is dispersive - Temporarily disable unit tests for DispersiveMultiLayer class - HDF5Reader::read() can now assemble a DispersiveMultiLayer - HDF5Reader has a method for reading directly into a vector<T> - H5Dimension can be passed a H5::DataSet as well as a H5::DataSpace * Update paths now we need HDF5 data as well as matlab data * TDMS builds and tests HDF5Reader::read_data_from_group (passes, no) * Fix seg-fault in read_dataset_from_group * Add DispersiveMultiLayer test * Update DispersiveMultiLayer tests to not be entangled with the MATLAB jargon * Update the CI so things actually work * Move content of benchmark_scripts readme into doc/developers * Update CI to produce unit test `.mat` and `.hdf5` data (#289) * Move content of benchmark_scripts readme into doc/developers * Update CI attempt 1 * Actually use the right syntax * Force python version to prevent MacOS using python2.7 * Rename files to better match the data they produce * Aplease windows syntax * Remove pip cache due to known windows bug: actions/setup-python#436 * Apply suggestions from code review * Add line that was lost in rebase --------- Co-authored-by: willGraham01 <[email protected]>
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Description
DispersiveMultiLayerclass from MATLAB - it is now astruct..matand.hdf5data #289)xyz_vectorstructwhich aims to replaceXYZVectorclass that depends on MATLABDispersiveMultiLayerin Classes to detach from MATLAB #285HDF5Reader::read_dataset_from_groupwhich can now robustly handle "normal"hdf5files (created via e.g.h5py) and.matfiles.create_hdf5_data.pyadded to repositoryThe
ci.yamlworkflow now runs thebenchmark/scripts which produce the unit test data, so there is no need to commit the binaries to the repository.Testing
HDF5Reader::read_dataset_from_groupDispersiveMultiLayeris_dispersive()methodHDF5Reader::read()method when passed a reference to aDispersiveMultiLayerobjectDocumentation
doc/developers.mdupdated to include details on how to add/edit/remove unit test data (see #289).