v0.5.0 release

[bruno-f-cruz]

Caution

Breaking changes:

• Rig and Task Logic schemas
• Datasets (schemas are now saved in the Behavior folder since sci comp does not support folders with names that do not correspond to modalities)

Note

Aind Rig mapper:
We will use the following rule:
Given a aind_behavior_services rig schema, we will use the rig_name property to try to find a corresponding <rig_name>.json file that will be attached to the session once data collection completes. The contents of this file will not be changed aside from a (de)serialization loop to validate it via aind-data-schemas

• Updates the treadmill interface version
• Changes rig schema to have a lookup calibration table for treadmill
• Treadmill is disengaged at the end of a session
• Add arbitrary patch statistics via lookup table Feat allow arbitrary patch depletion statistics #288
• Updates schemas and services infrastructure to Aind Behavior Services 0.8.0
• Adds arbitrary pdf specification as a new distribution to sample from
• Update screen calibration source (deprecated local files in favor of schemas)
• Add watchdog instance to launcher script
• Logging:
  • Session name is now derived from the session schema instead of created in bonsai
  • All subfolders in the session root now strictly adhere to scientific computing standards
  • Other folder was removed from the session root. Contents are now in Behavior/Logs
• Implemented block logic (closes Add block structure to task #203)
• Fixes Choice cue and water delivered outside of odor site #297
• Fixes Freeze after Start Experiment #301
• Adds support for uv package manager
• Edits UI to reflect Small modifications to Animal ID and Stage in visualizer #302
• Implements the launcher from https://github.com/AllenNeuralDynamics/Aind.Behavior.ExperimentLauncher
• Adds a aind data mapper for session and rig jsons