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21 Open 28 Closed
21 Open 28 Closed
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Issues list

small test dataset
#122 opened Jul 25, 2024 by dalyasalih19
1
Comparing STR length from STRling, which value would be appropriate to use?
#121 opened Feb 21, 2024 by chanhee22kim
strling-outliers.py: Incompatibility with newer Pandas version
#119 opened Feb 13, 2024 by ryanmcggg
4
Typo in command line help documentation Improvements or additions to documentation good first issue Good for newcomers lower priority
#118 opened Dec 8, 2023 by hdashnow
L.start <= R.start
#113 opened Mar 7, 2023 by christopher-schroeder
3
STRling warning message and empty binaries
#107 opened Jun 29, 2022 by hdashnow
Exclude NaN rows in STRs.tsv output good first issue Good for newcomers
#105 opened Apr 20, 2022 by hdashnow
0-length intervals
#104 opened Jan 10, 2022 by hdashnow
Assertion error for reads without sequence
#103 opened Jan 7, 2022 by christopher-schroeder
5
Issue with low proportion_repeat
#102 opened Dec 16, 2021 by mhguo1
7
Inconsistent soft-clipped reads may impact length estimates wontfix This will not be worked on
#93 opened Mar 24, 2021 by hdashnow
Full diploid genotypes for 2 short alleles enhancement New feature or request
#91 opened Mar 17, 2021 by seboyden
1
conda install error message (still installs)
#86 opened Feb 25, 2021 by hdashnow
1
Support hemizygous calls in males on sex chromosomes enhancement New feature or request
#62 opened May 14, 2020 by hdashnow
Need a more useful error for when bed file chromosomes don't match reference genome
#54 opened Mar 31, 2020 by hdashnow
Do some sensible filtering by default enhancement New feature or request
#52 opened Mar 6, 2020 by hdashnow
STRling version number is in two places wontfix This will not be worked on
#34 opened Dec 9, 2019 by hdashnow
Hide advanced parameters enhancement New feature or request
#20 opened Oct 31, 2019 by hdashnow
Evaluate bounds soft-clip support using entropy enhancement New feature or request lower priority
#12 opened Oct 22, 2019 by hdashnow
1
Output VCF enhancement New feature or request
#11 opened Oct 22, 2019 by hdashnow
3
For cases where we are uncertain about the bounds, look at the reference genome sequence
#4 opened Jul 18, 2019 by hdashnow
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