ewaff

Efficient and flexible algorithms for EWAS

Installation

library(remotes)
install_github("perishky/ewaff")

Example analysis

tutorial.

Features to add

• multi-core optional for windows or other debilitated users
• use tableone for output (per model) in EWAS object and report
• EWAS comparison function
• expand EWAS report for multi-variable ewas
• support adjustment for case-control
• flexible batch control
• correlation threshold for association between variable of interest and SVAs
• a function called ewaff.pace() that runs the PACE workflow
• Another way to potentially speed up SVA: https://cran.r-project.org/package=irlba