Repositories list

• prophyle

  Public
  Accurate, resource-frugal and deterministic DNA sequence classifier.

  bioinformaticsmetagenomicsviruses+ 9bwtbacteriaphylogenymetagenomic-classificationburrows-wheeler-transformk-mersphylogenetic-compression+ 2

  Python

  •

  MIT License

  •5•33•40•3•Updated Dec 1, 2024Dec 1, 2024

• prophyle.github.io

  Public
  HTML

  •0•0•0•0•Updated Oct 1, 2024Oct 1, 2024

• prophasm2

  Public
  C++

  •

  MIT License

  •0•0•0•0•Updated Sep 27, 2024Sep 27, 2024

• prophex

  Public
  ProPhex – an exact k-mer index using Burrows-Wheeler Transform

  indexbwtburrows-wheeler-transform+ 3k-mersprophylekmer-indexing

  C

  •

  MIT License

  •1•6•14•2•Updated Oct 2, 2023Oct 2, 2023

• prophasm

  Public
  ProphAsm – a rapid computation of simplitigs directly from k-mer sets

  de-bruijn-graphsk-merssimplitigs+ 1prophyle

  C++

  •

  MIT License

  •6•26•10•1•Updated Feb 17, 2023Feb 17, 2023