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Ampliseq Version 2.4.1
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@d4straub d4straub released this 07 Dec 15:52
· 1014 commits to master since this release
2.4.1
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nf-core/ampliseq version 2.4.1 - 2022-12-07

Summary of changes

Most importantly this release fixes a bug in 2.4.0 that prevented the use of the SILVA v138 database with QIIME2.

Detailed changes

Added

  • #494 - --metadata_category_barplot accepts a comma separated list of metadata categories and plots for each barplots with average relative abundance.

Changed

  • #492 - --qiime_adonis_formula accepts a comma separated list of formulas.

Fixed

  • #486 - Fixed typo in error message stating --skip_classifer instead of --classifier.
  • #487,#488 - Update stale links in usage documentation.
  • #489 - Reduce linting warnings for nf-core tools version 2.5.1.
  • #491 - Make output from --addSH match UNITE format by replacing spaces with underscores.
  • #495 - Template update for nf-core/tools version 2.6
  • #501 - Check for empty fields in samplesheet column "run" and raise an appropriate error.
  • #503 - Changed environment for formatting databases.
  • #504 - Fixed warnings with nextflow 22.10 (and later) about processes that are defined more than once.

Dependencies

Tool Previous version New version
QIIME2 2021.8 2022.8
Assets 2
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