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Visualise pose tracks as a napari Points layer #47

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Tracked by #31
niksirbi opened this issue Sep 20, 2023 · 1 comment · May be fixed by #253
Open
Tracked by #31

Visualise pose tracks as a napari Points layer #47

niksirbi opened this issue Sep 20, 2023 · 1 comment · May be fixed by #253
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@niksirbi
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enhancement New optional feature GUI Graphical User Interface

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@niksirbi
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A core feature of the envisioned napari frontend (see #31) is the ability load pose tracks from DeepLabCut and SLEAP.
We need to write readers that wrap around the functions in load_poses.py.
@niksirbi niksirbi added the enhancement New optional feature label Sep 20, 2023
@niksirbi niksirbi changed the title Napari plugin reader for pose tracks Napari plugin readers for pose tracks Sep 20, 2023
@niksirbi niksirbi mentioned this issue Sep 20, 2023
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@niksirbi niksirbi added the GUI Graphical User Interface label Sep 20, 2023
@niksirbi niksirbi self-assigned this Sep 20, 2023
@niksirbi niksirbi added this to the v0.1 - alpha release milestone Oct 16, 2023
@niksirbi
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We decided to not implement this feature as a reader plugin. The main reason is that we need to also pass the source software when loading a file, the file path alone is not enough.

Instead we are making a loader widget as part of the movement napari plugin. Users will be able to specify file path, fps and source software through the widget. See ongoing work in #112

@niksirbi niksirbi linked a pull request Jul 30, 2024 that will close this issue
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@sfmig sfmig removed this from the v0.1 - alpha release milestone Aug 27, 2024
@sfmig sfmig changed the title Napari plugin readers for pose tracks Visualise pose tracks as a napari Points layer Aug 27, 2024
@sfmig sfmig linked a pull request Aug 27, 2024 that will close this issue
Qt widget for loading pose datasets as napari Points layers #253
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enhancement New optional feature GUI Graphical User Interface
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movement progress tracker
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Qt widget for loading pose datasets as napari Points layers neuroinformatics-unit/movement
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@niksirbi @sfmig