Applied Bioinformatics 2023

1. Linux OS, Linux command lines, basic bash script and awk
2. Basic R, statistics with R, and data visualization with R
3. Review basic molecular biology, the human genome, gene annotation, and the other databases
4. Basic GWAS: case/control and quantitative traits
5. NGS and upstream analysis for DNA-seq
6. Downstream analysis for DNA-seq
7. Introduction to bulk RNA-seq, library types, and experiment design
8. PolyA bulk RNA-seq analysis
9. Long non-coding bulk RNA-seq analysis
10. Presenting group projects