hotfix 0.5.1: partially installed dask should not prevent loading mer…

…fish
int-brain-lab · Feb 14, 2024 · cf51e88 · cf51e88
1 parent fd78ad0
commit cf51e88
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Showing 3 changed files with 7 additions and 2 deletions.
diff --git a/CHANGELOG.md b/CHANGELOG.md
@@ -1,3 +1,8 @@
+## [0.5.1]
+### Modified
+- `iblatlas.genomics.merfish.load` does not return an error when dask is installed but
+dask.dataframe is not.
+
 ## [0.5.0]
 ### Added
 - `iblatlas.genomics.merfish` module for working with the Allen gene expression

diff --git a/iblatlas/__init__.py b/iblatlas/__init__.py
@@ -194,4 +194,4 @@
 .. [10] Allen Mouse Common Coordinate Framework Technical White Paper (October 2017 v3)
    http://help.brain-map.org/download/attachments/8323525/Mouse_Common_Coordinate_Framework.pdf
 """
-__version__ = '0.5.0'
+__version__ = '0.5.1'
diff --git a/iblatlas/genomics/merfish.py b/iblatlas/genomics/merfish.py
@@ -38,7 +38,7 @@ def load(folder_cache=None):
         import dask.dataframe as dd
         df_cells = dd.read_parquet(list(folder_cache.rglob('*_cells.pqt')))
         df_cells = df_cells.compute()
-    except ImportError:
+    except Exception:  # there are more subtle errors than import errors if dask is intalled partially
         df_cells = pd.concat([pd.read_parquet(f) for f in folder_cache.rglob('*_cells.pqt')])
     # reads in the other tables
     df_classes = pd.read_parquet(folder_cache.joinpath('classes.pqt'))