This repository houses conversion piplines for the IBL data releases, including the Brain Wide Map project.
For Brain Wide Map,
git clone https:/github.com/catalystneuro/IBL-to-nwb
cd IBL-to-nwb
pip install -e .[brainwide_map]
(not tested on all platforms or Python environments)
From the first level of the repo as the working directory,
python ibl_to_nwb/updated_conversion/brainwide_map/convert_brainwide_map_processed_only_parallel.py
The script contains some values that might want to be changed, such as number_of_parallel_jobs, or base_path if not running on the DANDI Hub.
The block about skipping sessions already on DANDI would need to be commented out if a 'patch' conversion + new release is being performed.