DESCRIPTION

Package: ExpressionAtlas
Version: 1.25.7
Date: 2022/10/22
Title: Download datasets from EMBL-EBI Expression Atlas
Authors@R: 
    c(person(given = "Maria",
           family = "Keays",
           role = c("aut"),
           comment = c(ORCID = "0000-0003-2034-601X")
      ),
        person(given = "Pedro",
           family = "Madrigal",
           role = c("cre"),
           email = "pmadrigal@ebi.ac.uk",
           comment = c(ORCID = "0000-0003-1959-8199")
      )
    )
Description: This package is for searching for datasets in EMBL-EBI Expression
    Atlas, and downloading them into R for further analysis. Each Expression Atlas
    dataset is represented as a SimpleList object with one element per platform.
    Sequencing data is contained in a SummarizedExperiment object, while microarray
    data is contained in an ExpressionSet or MAList object.
biocViews: ExpressionData, ExperimentData, SequencingData,
        MicroarrayData, ArrayExpress
Depends: R (>= 4.2.0), methods, Biobase, SummarizedExperiment, limma,
        S4Vectors, xml2, RCurl, jsonlite, BiocStyle
Imports: utils, XML, httr
Suggests: knitr, testthat, rmarkdown
VignetteBuilder: knitr
Collate: functions.R
License: GPL (>= 3)
LazyLoad: yes
NeedsCompilation: no