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'Cell type' erroneously shown as default display value for plots and marker gene heatmap #473

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sfexova opened this issue Sep 20, 2024 · 0 comments

sfexova commented Sep 20, 2024

According to the current rules, the default display option for both cell plots and marker gene heatmap should be 'inferred cell type - ontology labels' and fall back to the default 'k' value where ICT is not available but in cases where the metadata display options include 'cell type' this is chosen instead:
https://www.ebi.ac.uk/gxa/sc/experiments/E-MTAB-10628/results/cell-plots
and gets chosen over the inferred cell type even where the latter is available:
https://wwwdev.ebi.ac.uk/gxa/sc/experiments/E-MTAB-10137/results/cell-plots

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