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Currently, inferred cell type-ontology labels and inferred cell type-authors labels are always hardcoded on the front end.
But ontology labels and authors' labels don't have marker gene data for all the experiments. So, we need to make these two options dynamic in the front end.
To enable dynamic selection of these two options in the front end, we need to check the backend marker genes data for inferred cell type-ontology labels and inferred cell type-authors labels for the experiment.
If the experiment includes marker gene data for the inferred cell type-ontology labels, then please enable that option in the front end. Else disable that option.
If the experiment includes marker gene data for the inferred cell type-authors labels, then please enable that option in the front end. Else disable that option.
Backend:
Check marker gene data availability for the inferred cell type-ontology labels per experiment. Return boolean flag
Check marker gene data availability for the inferred cell type-authors labels per experiment. Return boolean flag
Front end:
Based on the backend boolean status for that experiment, the frontend should enable or disable inferred cell types options under the marker gene heatmap dropdown menu.
Inferred cell type-authors labels should be disabled as we don't have marker gene data after our fix.
The text was updated successfully, but these errors were encountered:
Hi @ke4, I had a discussion with Silvie and gained clarity on the story. I updated the description box. Please review it and let me know if any further changes are needed.
Task Details:
Currently, inferred cell type-ontology labels and inferred cell type-authors labels are always hardcoded on the front end.
But ontology labels and authors' labels don't have marker gene data for all the experiments. So, we need to make these two options dynamic in the front end.
To enable dynamic selection of these two options in the front end, we need to check the backend marker genes data for inferred cell type-ontology labels and inferred cell type-authors labels for the experiment.
If the experiment includes marker gene data for the inferred cell type-ontology labels, then please enable that option in the front end. Else disable that option.
If the experiment includes marker gene data for the inferred cell type-authors labels, then please enable that option in the front end. Else disable that option.
Backend:
Front end:
Inferred cell type-authors labels should be disabled as we don't have marker gene data after our fix.
The text was updated successfully, but these errors were encountered: