This is under construction. Anyway...
Download, build, and run mvn install from clesperantoj-prototype.
Afterwards open this project in your IDE and run the main function in net.clesperanto.CLIJ3.
Configure the path where your Fiji is installed here and run mvn install from this directory. Afterwards, you can execute example scripts like this one in your Fiji.
We acknowledge support by the Deutsche Forschungsgemeinschaft under Germany’s Excellence Strategy (EXC2068) Cluster of Excellence Physics of Life of TU Dresden. This project has been made possible in part by grant number 2021-237734 (GPU-accelerating Fiji and friends using distributed CLIJ, NEUBIAS-style, EOSS4) from the Chan Zuckerberg Initiative DAF, an advised fund of the Silicon Valley Community Foundation.