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bioCADDIE

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  1. WG3-MetadataSpecifications WG3-MetadataSpecifications Public

    WG3 Metadata Specification

    Python 28 13

  2. elasticsearch-queryexpansion-plugin elasticsearch-queryexpansion-plugin Public

    A simple ElasticSearch plugin wrapping around the search endpoint to provide Rocchio query expansion

    Java 16 7

  3. Foundry-ES Foundry-ES Public

    Biocaddie Data Processing Pipeline. A data ingestion pipeline that collects and transforms original metadata information to a unified metadata model, called DatA Tag Suite (DATS).

    Java 8 3

  4. uiuc-biocaddie-pilot uiuc-biocaddie-pilot Public

    BioCADDIE challenge

    Shell 8 4

  5. DataRank DataRank Public

    DataRank algorithm based on active learning

    MATLAB 5 1

  6. BioCaddie-core-UI BioCaddie-core-UI Public

    The main web client and user interface for the total environment, that has access to all the services and maintains personalization with the user login functionality.

    PHP 4

Repositories

Showing 10 of 16 repositories
  • term-builder Public
    biocaddie/term-builder’s past year of commit activity
    Python 1 2 0 2 Updated Oct 18, 2023
  • Foundry-ES Public

    Biocaddie Data Processing Pipeline. A data ingestion pipeline that collects and transforms original metadata information to a unified metadata model, called DatA Tag Suite (DATS).

    biocaddie/Foundry-ES’s past year of commit activity
    Java 8 3 0 0 Updated Feb 8, 2019
  • WG3-MetadataSpecifications Public

    WG3 Metadata Specification

    biocaddie/WG3-MetadataSpecifications’s past year of commit activity
    Python 28 13 11 0 Updated Nov 5, 2018
  • foundry-nlp-enhancer Public

    NLP enhancer plugin for Foundry-ES pipeline management system. The service that enhances elasticsearch functionality with NLP elements.

    biocaddie/foundry-nlp-enhancer’s past year of commit activity
    Java 1 1 0 0 Updated Sep 26, 2018
  • NLP-Server Public

    NLP-Server for bioCADDIE ingestion process. The NLP processing software that enhances the current elasticsearch data after ingestion.

    biocaddie/NLP-Server’s past year of commit activity
    Java 1 1 0 0 Updated Sep 24, 2018
  • metadata-transformations Public

    Repository for bioCADDIE metadata curation of repository configurations and metadata transformations

    biocaddie/metadata-transformations’s past year of commit activity
    1 1 0 0 Updated May 21, 2018
  • isee-delve Public

    Pilot Project 2.2 - Intelligent Search expansion and Visualization of Datasets (iSee-DELVE)

    biocaddie/isee-delve’s past year of commit activity
    JavaScript 3 1 0 1 Updated May 21, 2018
  • BioCaddie-core-UI Public

    The main web client and user interface for the total environment, that has access to all the services and maintains personalization with the user login functionality.

    biocaddie/BioCaddie-core-UI’s past year of commit activity
    PHP 4 0 0 1 Updated Apr 24, 2018
  • DATS Public

    Repository for dereferenceable DatA Tag Suite (DATS) JSON schemas and context files

    biocaddie/DATS’s past year of commit activity
    Python 4 0 0 0 Updated Feb 8, 2018
  • elasticsearch-queryexpansion-plugin Public

    A simple ElasticSearch plugin wrapping around the search endpoint to provide Rocchio query expansion

    biocaddie/elasticsearch-queryexpansion-plugin’s past year of commit activity
    Java 16 MIT 7 1 0 Updated Aug 5, 2017
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