Merge pull request #1214 from jtc42/patch-1 #307
Workflow file for this run
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| name: CI | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.event.number }}-${{ github.event.ref }} | |
| cancel-in-progress: true | |
| on: [push, pull_request] | |
| permissions: | |
| contents: read | |
| jobs: | |
| sdist: | |
| name: Create sdist | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| submodules: true | |
| - uses: actions/setup-python@v5 | |
| name: Install Python | |
| with: | |
| python-version: 3.x | |
| - name: Ubuntu library headers | |
| run: | | |
| sudo apt update | |
| # Keep in sync with "Prerequisites" in User's Guide. | |
| sudo apt install libblosc-dev libbz2-dev libhdf5-dev liblz4-dev liblzo2-dev libsnappy-dev libzstd-dev zlib1g-dev | |
| - name: Source distribution | |
| run: | | |
| pip install build | |
| python -m build --sdist | |
| - name: Save source distribution | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: tables-sdist | |
| path: dist/*.tar.gz | |
| build: | |
| name: ${{ matrix.os }} ${{ matrix.python }} ${{ matrix.numpy }} ${{ matrix.name }} | |
| runs-on: ${{ matrix.os }} | |
| needs: sdist | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| # macos-13 is Intel, macos-latest is Apple Silicon | |
| os: [ubuntu-latest, macos-13, macos-latest, windows-latest] | |
| # Keep in sync with ``project.classifiers`` in ``pyproject.toml``. | |
| python: ['3.10', '3.11', '3.12'] | |
| numpy: ['numpy'] | |
| include: | |
| - os: ubuntu-latest | |
| python: '3.12' | |
| numpy: 'numpy>=2.1.dev0' | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| submodules: true | |
| - name: Set up Python ${{ matrix.python }} | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| python-version: ${{ matrix.python }} | |
| auto-update-conda: true | |
| channels: conda-forge | |
| channel-priority: strict | |
| - name: Install dependencies | |
| run: | | |
| # Keep in sync with | |
| # "Prerequisites" in User's Guide, | |
| # ``build-system.requires`` in ``pyproject.toml``. | |
| conda install -q setuptools pip wheel python-build packaging numpy cython bzip2 hdf5 lzo | |
| python -m pip install --require-hashes -r requirements.txt | |
| python -m pip install --extra-index-url https://pypi.anaconda.org/scientific-python-nightly-wheels/simple '${{ matrix.numpy }}' | |
| # Keep in sync with ``project.optional-dependencies.doc`` in ``pyproject.toml``. | |
| # conda install sphinx sphinx_rtd_theme numpydoc ipython | |
| - name: Get source distribution | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: tables-sdist | |
| - name: Installation | |
| run: | | |
| python -m pip install -v tables-*.tar.gz | |
| - name: 'Run test' | |
| run: | | |
| cd .. && python -m tables.tests.test_all -v | |
| pt2to3 -h | |
| ptrepack -h | |
| ptdump -h | |
| pttree -h | |
| build_cblosc: | |
| name: Sdist with cblosc2 | |
| runs-on: ubuntu-latest | |
| needs: sdist | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| fetch-depth: 0 | |
| submodules: true | |
| - name: Set up Python | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| auto-update-conda: true | |
| channels: conda-forge | |
| channel-priority: strict | |
| - name: Install dependencies | |
| run: | | |
| # Keep in sync with "Prerequisites" in User's Guide, | |
| # ``build-system.requires`` in ``pyproject.toml``. | |
| conda install setuptools pip wheel python-build packaging py-cpuinfo "numpy>=2" cython numexpr bzip2 hdf5 lzo 'typing_extensions>=4.4.0' c-blosc2 | |
| - name: Get source distrubtion | |
| uses: actions/download-artifact@v4 | |
| with: | |
| name: tables-sdist | |
| - name: Installation | |
| run: | | |
| python -m pip install -v tables-*.tar.gz --no-deps | |
| - name: Python blosc2 wheel or conda pkg is not installed | |
| run: | | |
| ! conda list | grep -E '^(python-)?blosc2' | |
| - name: 'Run test' | |
| run: | | |
| cd .. && python -m tables.tests.test_all -v | |
| pt2to3 -h | |
| ptrepack -h | |
| ptdump -h | |
| pttree -h |