Add flag to omit timestamp in output directory

[sfmig]

Description

What is this PR?

• Bug fix
• Addition of a new feature
• Other

Why is this PR needed?
At the moment each run of the command detect-and-track will generate a timestamped directory for the outputs (csv with detections and optionally frames and tracked video).

If we use a bash script to run this command over a set of videos (as we do in the cluster, see #251), we create one timestamped output directory per video, which is inconvenient and confusing.

An easy way to put all outputs from a set of videos under the same directory is to optionally remove the timestamp suffix that is applied by default to each output directory.

What does this PR do?

• It adds a flag to the CLI that removes the timestamped suffix from the output directory name.
• It adds tests for the prep_outputs method of the tracker class
• It adapts the existing tests for the constructor of the tracker class to use pytest's monkeypatching (rather than unitttest mock).
  • this is to stay consistent with the rest of the tests in the codebase.

References

Another option could be for the user to be responsible of specifying the full path to the output directory. This is covered in #246. I opted for this option for now, to keep in line with the model evaluation script and the save_frames and frames_output_dir flags, but this can be reviewed in the future.

How has this PR been tested?

Tests pass locally and in CI.

Does this PR require an update to the documentation?

A comment about the new flag has been added to the README.

Checklist:

• The code has been tested locally
• Tests have been added to cover all new functionality
• The documentation has been updated to reflect any changes
• The code has been formatted with pre-commit

[codecov-commenter]

Codecov Report

Attention: Patch coverage is 83.33333% with 1 line in your changes missing coverage. Please review.

Project coverage is 47.98%. Comparing base (c3e653d) to head (82df997).

Files with missing lines	Patch %	Lines
crabs/tracker/track_video.py	83.33%	1 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #253      +/-   ##
==========================================
+ Coverage   47.76%   47.98%   +0.22%     
==========================================
  Files          24       24              
  Lines        1564     1567       +3     
==========================================
+ Hits          747      752       +5     
+ Misses        817      815       -2     

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