.gitignore

# History files
.Rhistory
.Rapp.history

# Session Data files
.RData

# User-specific files
.Ruserdata

# Example code in package build process
*-Ex.R

# Output files from R CMD build
/*.tar.gz

# Output files from R CMD check
/*.Rcheck/

# RStudio files
.Rproj.user/

# produced vignettes
vignettes/*.html
vignettes/*.pdf

# OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3
.httr-oauth

# knitr and R markdown default cache directories
*_cache/
/cache/

# Temporary files created by R markdown
*.utf8.md
*.knit.md
Rplots.pdf

# R Environment Variables
.Renviron

# Snakemake files
.snakemake
logs/

# Snakemake status outputs
.hab_prediction_env_restored
.model_training_complete

# large data files
data/weather/compressed/US*gz
data/shapefiles/Iowa_County_Boundaries
data/land_use/MRLC_Iowa_2019
data/weather/all_stations.csv

# Scratch directory for practice
scratch

# Individual, large tiffs
figures/feature_importance/all_importances.tiff
figures/historical_hab_occurrences.tiff