DESCRIPTION

Package: shinyngs
Title: Shiny apps for NGS data
Version: 2.0.0
Authors@R: person("Jonathan", "Manning", email = "jonathan.manning@healx.io", role = c("aut", "cre"))
Description: Provides Shiny applications for various array and NGS applications.
    Currently very RNA-seq centric, with plans for expansion.
Depends:
    R (>= 3.2.2),
    SummarizedExperiment
License: AGPL (>= 3)
LazyData: true
Imports:
    cluster,
    cpp11,
    data.table,
    d3heatmap (>= 0.6.1.2),
    dplyr,
    DT (>= 0.2),
    ggdendro,
    ggplot2,
    GSEABase,
    limma,
    methods,
    pheatmap,
    plotly (>= 4.3.4),
    plyr,
    RColorBrewer,
    reshape2,
    scatterplot3d,
    shiny,
    shinyBS,
    shinyjs,
    shinythemes,
    stats,
    utils,
    yaml
Suggests:
    airway,
    BiocStyle,
    BiocManager,
    biomaRt,
    devtools,
    DEXSeq,
    Gviz,
    knitr,
    markdown,
    optparse,
    rmarkdown,
    rsconnect,
    testthat (>= 3.0.0),
    zhangneurons
Remotes:
    cran/d3heatmap,
    pinin4fjords/zhangneurons
RoxygenNote: 7.2.3
VignetteBuilder: knitr
Config/testthat/edition: 3