ceci_nic5.md

nf-core/configs: NIC5 CÉCI Cluster Configuration

This configuration provides sensible default parameters to run nf-core pipelines (and nf-core compatible pipelines) on the CÉCI NIC5 cluster. To use it, add -profile ceci_nic5 when running a pipeline. This will automatically download the ceci_nic5.config.

The configuration sets slurm as the default executor and enables singularity as container runner.

Loading the required modules

Before running a pipeline, one should load nextflow using the environment module system. This can be achieved with:

# Load modules
module load 'Nextflow/21.08.0'

---

Built with ❤️ by the GIGA Bioinformatics Team