Release 2.13.0

• Deprecated ibllib.version
• Fix Globus patcher
• Add SpikeSorting Loader samples2times function
• Fix atlas.BrainCoordinate.xyz2i functions to not quietly wrap indices out of volume bounds.
• Set jobs to Held if parent jobs are Started or Abandoned as well
• Reverse matplotlib colorbars in density displays

Video compression jobs and jobs with waiting parents

• Set video compression jobs to priority 90
• Set jobs to Held if parents are Waiting

Large jobs as service

• brainbox.io.one.SpikeSortingLoader: option to load using collection argument
• Restructuring of how jobs are run on local servers, run large jobs as service

Parents Incomplete status

• Allow parent tasks to be 'Incomplete' to run task on local server
• Change one base_url for dlc_qc_plot on cortexlab

Fix moot release accident

• Fix moot release accident

Data handler cortexlab

• Data handler connects to correct alyx database on cortexlab

Improve EphysPostDLC

• Fixes to EphysPostDLC
• Small change to storing in dsp.voltage.decompress_destripe_cbin function

Task queue fix

• Small fixes to local server task queues

Minor changes spikeglx, dlc_qc_plot, atlas regions

• Authenticate alyx user in Task class
• Some fixes to make dlc_qc_plot in EphysPostDLC more reliable
• SpikeGlx:
  • supports reading of flat binary files without meta data
• atlas.Regions:
  • add support for region ordering in BrainRegions object
  • bugfix in transposing of RGB image data for coronal slice plots
• voltage: decompress cbin
  • add support for custom spikeglx.Reader

2.9.1

What's Changed

• deprecation warnings and documentation for spike sorting loading method
• bugfix: remove lru_cache on AllenAtlas class for iblviewer