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Registration of non-isocortical recording tracks #29

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m-beau opened this issue Sep 16, 2019 · 1 comment
Open

Registration of non-isocortical recording tracks #29

m-beau opened this issue Sep 16, 2019 · 1 comment

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@m-beau
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m-beau commented Sep 16, 2019

Thank you for this great tool, it is awesome!

It is clear though that its designer bear particular interest in cortical and subcortical recordings - in order to make the probe mapping work in the cerebellum, the top of the brain has to be re-called 'CBX' (Allen alias for cerebellar cortex) rather than 'Isocortex':

Display_Probe_Track.m, l.122:

isoCtxId = num2str(st.id(strcmp(st.acronym, 'CBX'))); %num2str(st.id(strcmp(st.acronym, 'Isocortex')));

I guess the universal acronym to use should be 'grey' or 'root', I will let the author decide.

Thanks again!

@philshams
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Thanks for the question and PRs! Most recent push should make it work for cerebellum and cortex.

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