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I'm new to kilosort3, and I cannot pass the first batch of preprocessing.
I'm using kilosort 3, on matlab 2022a, for 32-ch u-probe neural recordings.
I load the data and map alright, (see snippet below), but after clicking "Run all", only one batch is processed and I get the following error message:
`Getting channel whitening matrix...
Channel-whitening matrix computed.
Time 0s. Loading raw data and applying filters...
Time 1s. Finished preprocessing 1 batches.
Error using indexing
Subscript indices must either be real positive integers or logicals.
Hi all,
I'm new to kilosort3, and I cannot pass the first batch of preprocessing.
I'm using kilosort 3, on matlab 2022a, for 32-ch u-probe neural recordings.
I load the data and map alright, (see snippet below), but after clicking "Run all", only one batch is processed and I get the following error message:
`Getting channel whitening matrix...
Channel-whitening matrix computed.
Time 0s. Loading raw data and applying filters...
Time 1s. Finished preprocessing 1 batches.
Error using indexing
Subscript indices must either be real positive integers or logicals.
Error in extractTemplatesfromSnippets (line 56)
wTEMP = dd(:, round(linspace(1, size(dd,2), nPCs)));
Error in datashift2 (line 4)
[wTEMP, wPCA] = extractTemplatesfromSnippets(rez, NrankPC);
Error in ksGUI/runPreproc (line 732)
obj.rez = datashift2(obj.rez, 1);
Error in ksGUI>@(
,)obj.runPreproc() (line 333)'Callback', @(
,)obj.runPreproc());Error while evaluating UIControl Callback.`
I have an NVIDIA T400 GPU installed and all drivers are running OK.
Any thoughts on what I might be doing wrong?
Thanks!
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