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Releases: brainglobe/cellfinder

v1.1.2

05 Apr 10:17
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New Contributors

Full Changelog: v1.1.1...v1.1.2

v1.1.1

27 Feb 10:05
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Fixes bug causing very long cell detection times

This bug affects many users, please update ASAP.

What's Changed

New Contributors

Full Changelog: v1.1.0...v1.1.1

v1.1.0

05 Jan 09:32
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Remove Duplicate Function

Removes a duplicated function from the package (#272) and standardises the corresponding calls across other functions within the package.

Various developer-related updates are also going in with this PR, which do not affect anything in the package.

  • Reinstating the brainmapper CI check, but as an optional check to indicate potential breakages
  • Additional tests added
  • Pre-commit config modified slightly.

What's Changed

Full Changelog: v1.0.0...v1.1.0

v1.0.0

03 Jan 12:21
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Merging of cellfinder-core and cellfinder-napari

This package combines the old cellfinder-core and cellfinder-napari packages into a single package, called cellfinder.
You can read more about this merging of functionality on the brainglobe blog.
Additionally, see the full changelog on the brainglobe website for details on what this package offers.

v0.8.1

13 Dec 10:41
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cellfinder has migrated!

v0.8.1 marks the end of the cellfinder package's current lifecycle, as it prepares for it's new role in BrainGlobe version 1.

Users are recommended to head over to brainglobe-workflows and install that package if they want to continue using the cellfinder command-line interface.

What's Changed

New Contributors

Full Changelog: v0.8.0...v0.8.1

Update to comply with `brainreg` v1.0.0

06 Nov 14:20
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Update to depend on brainreg v1.0.0

Users may wish to uninstall brainreg-napari and brainreg-segment before updating. For details, see our blog post.

What's Changed

Full Changelog: v0.7.1...v0.8.0

Version 0.3.12

30 Apr 14:01
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Main updates

  • Windows bug fix thanks to @EmanPaoli
  • Prebuilt wheels now released for Linux, Windows and macOS (untested)

Developers

  • Update dependencies & refactor usage of amap api

Version 0.3.11

21 Apr 14:39
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Further refactoring

Version 0.3.10

16 Apr 09:34
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Minor refactoring

Version 0.3.9

11 Mar 09:53
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Version 0.3.9 (2020-03-11)

Added

Training can now be saved every N epochs using --checkpoint-interval

Fixed

  • Bug fixed in cellfinder_xml_crop
  • Pandas dependencies updated thanks to @amedyukhina