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pyproject.toml
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pyproject.toml
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[project]
name = "brainglobe-stitch"
authors = [{name = "Brainglobe Developers", email= "[email protected]"}]
description = "A tool to stich large tiled datasets generated by the mesoSPIM."
readme = "README.md"
requires-python = ">=3.10"
dynamic = ["version"]
license = {text = "BSD-3-Clause"}
classifiers = [
"Development Status :: 2 - Pre-Alpha",
"Framework :: napari",
"Programming Language :: Python",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.12",
"Operating System :: OS Independent",
"License :: OSI Approved :: BSD License",
"Topic :: Scientific/Engineering :: Image Processing",
]
dependencies = [
"napari>=0.4.18",
"brainglobe-utils>=0.3.4",
"h5py",
"napari-ome-zarr",
"ome-zarr",
"zarr",
"numpy",
"qtpy",
"tifffile"
]
[project.urls]
"Homepage" = "https://brainglobe.info"
"Bug Tracker" = "https://github.com/brainglobe/brainglobe-stitch/issues"
"Documentation" = "https://github.com/brainglobe/brainglobe-stitch#README.md"
"Source Code" = "https://github.com/brainglobe/brainglobe-stitch"
"User Support" = "https://forum.image.sc/tag/brainglobe"
[project.entry-points."napari.manifest"]
mesospim-stitcher = "brainglobe_stitch:napari.yaml"
[project.optional-dependencies]
dev = [
"pytest",
"pytest-cov",
"pytest-mock",
"pytest-qt",
"pyqt5",
"coverage",
"tox",
"pooch",
"black",
"mypy",
"pre-commit",
"ruff",
"setuptools_scm",
]
[build-system]
requires = [
"setuptools>=45",
"wheel",
"setuptools_scm[toml]>=6.2",
]
build-backend = "setuptools.build_meta"
[tool.setuptools]
include-package-data = true
[tool.setuptools.packages.find]
include = ["brainglobe_stitch*"]
exclude = ["tests", "docs*"]
[tool.pytest.ini_options]
addopts = "--cov=brainglobe_stitch"
[tool.black]
target-version = ['py310', 'py311', 'py312']
skip-string-normalization = false
line-length = 79
[tool.setuptools_scm]
[tool.check-manifest]
ignore = [
".yaml",
"tox.ini",
"tests/",
"tests/test_unit/",
"tests/test_integration/",
"docs/",
"docs/source/",
]
[tool.ruff]
line-length = 79
exclude = ["__init__.py","build",".eggs"]
select = ["I", "E", "F"]
fix = true
[tool.tox]
legacy_tox_ini = """
[tox]
envlist = py{310,311,312}
isolated_build = True
[gh-actions]
python =
3.10: py310
3.11: py311
3.12: py312
[testenv]
passenv =
CI
GITHUB_ACTIONS
DISPLAY
XAUTHORITY
NUMPY_EXPERIMENTAL_ARRAY_FUNCTION
PYVISTA_OFF_SCREEN
extras =
dev
commands =
pytest -v --color=yes --cov=brainglobe-stitch --cov-report=xml
"""