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read down-sampled stack in parallel #6

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raacampbell opened this issue Jan 4, 2017 · 4 comments
Open

read down-sampled stack in parallel #6

raacampbell opened this issue Jan 4, 2017 · 4 comments
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@raacampbell
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Can be very slow to load over the network. Should be faster if we parfor the loading.

@alexanderbrown
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Problem is that it's a single file so i'm not sure it can be parallelised. I'll take a look.

Not sure why it should be particularly slow over the network though?

@alexanderbrown alexanderbrown self-assigned this Jan 4, 2017
@raacampbell
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At least with imread on a multi-page TIFF I know it's possible to read the individual pages in parallel. It's already done with a for loop so simply making it parfor should be sufficient.

@alexanderbrown
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I'll give it a go

@alexanderbrown
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Just had a quick look. It may work for files read using the imread approach, but most files need to be read using a Tiff object which won't easily work in parallel. I'll try a couple of things to get it to work

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