|--- RheMAP
|--- notebooks
|--- templates
|--- D99
|--- D99_atlas_1.2a.nii.gz
|--- D99_atlas_1.2a_in_MNI.nii.gz
|--- D99_template.nii.gz
|--- INIA
|--- inia19-t1-brain_truncated.nii.gz
|--- MNI
|--- macaque_25_model-MNI_brain.nii.gz
|--- NMT
|--- NMT_v1.2
|--- NMT_SS.nii.gz
|--- NMT_v1.3
|--- NMT_SS.nii.gz
|--- YRK
|--- MacaqueYerkes19_T1w_0.5mm_brain.nii.gz
After downloading the warp files and warped templates from Zenodo, we suggest you include them like this:
|--- RheMAP
|--- notebooks
|--- templates
|--- warps
|--- final
|--- D99_to_INIA_CompositeWarp.nii.gz
|--- D99_to_MNI_CompositeWarp.nii.gz
|--- etc
|--- linear
|--- D99_to_INIA_affine_0GenericAffine.mat
|--- D99_to_MNI_affine_0GenericAffine.mat
|--- etc
|--- nonlinear
|--- D99_to_INIA_1InverseWarp.nii.gz
|--- D99_to_INIA_1Warp.nii.gz
|--- D99_to_MNI_1InverseWarp.nii.gz
|--- D99_to_MNI_1Warp.nii.gz
|--- etc
|--- warped_templates
|--- final
|--- D99_in_INIA_composite.nii.gz
|--- D99_in_MNI_composite.nii.gz
|--- etc
|--- linear
|--- D99_in_INIA_linear.nii.gz
|--- D99_in_MNI_linear.nii.gz
|--- etc
|--- nonlinear
|--- D99_in_INIA_linear+SyN.nii.gz
|--- D99_in_MNI_linear+SyN.nii.gz
|--- etc