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Where colnames(DNAm) and Weidner_CpGs should be switched places in the match() function call.
As written the line always selects first 3 cytosines from the data.
In addition the coefficients provided in the methods section of the paper are different from the ones assigned in the code.
The text was updated successfully, but these errors were encountered:
@ausrinesv detected that currently Weidner clock returns wrong results because of an error in CpG matching as well as possibly wrong coefficients.
The error is in this line:
methylCIPHER/R/calcWeidner.R
Line 40 in e62937e
Where
colnames(DNAm)
andWeidner_CpGs
should be switched places in thematch()
function call.As written the line always selects first 3 cytosines from the data.
In addition the coefficients provided in the methods section of the paper are different from the ones assigned in the code.
The text was updated successfully, but these errors were encountered: